Back door modulation of the farnesoid X receptor: design, synthesis, and biological evaluation of a series of side chain modified chenodeoxycholic acid derivatives

J Med Chem. 2006 Jul 13;49(14):4208-15. doi: 10.1021/jm060294k.

Abstract

Carbamate derivatives of bile acids were synthesized with the aim of systematically exploring the potential for farnesoid X receptor (FXR) modulation endowed with occupancy of the receptor's back door, localized between loops H1-H2 and H4-H5. Since it was previously shown that bile acids bind to FXR by projecting the carboxylic tail opposite the transactivation function 2 (AF-2, helix 12), functionalization of the side chain is not expected to interfere directly with the orientation of H12 but can result in a more indirect way of receptor modulation. The newly synthesized compounds were extensively characterized for their ability to modulate FXR function in a variety of assays, including the cell-free fluorescence resonance energy transfer (FRET) assay and the cell-based luciferase transactivation assay, and displayed a broad range of activity from full agonism to partial antagonism. Docking studies clearly indicate that the side chain of the new derivatives fits in a so far unexploited receptor cavity localized near the "back door" of FXR. We thus demonstrate the possibility of achieving a broad FXR modulation without directly affecting the H12 orientation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cell Line, Tumor
  • Chenodeoxycholic Acid / analogs & derivatives*
  • Chenodeoxycholic Acid / chemical synthesis*
  • Chenodeoxycholic Acid / pharmacology
  • DNA-Binding Proteins / agonists*
  • DNA-Binding Proteins / genetics
  • DNA-Binding Proteins / metabolism
  • Drug Design
  • Fluorescence Resonance Energy Transfer
  • Genes, Reporter
  • Histone Acetyltransferases
  • Humans
  • Ligands
  • Luciferases / genetics
  • Models, Molecular
  • Nuclear Receptor Coactivator 1
  • Receptors, Cytoplasmic and Nuclear
  • Receptors, Steroid / metabolism
  • Response Elements
  • Structure-Activity Relationship
  • Transcription Factors / agonists*
  • Transcription Factors / genetics
  • Transcription Factors / metabolism
  • Transfection

Substances

  • DNA-Binding Proteins
  • Ligands
  • Receptors, Cytoplasmic and Nuclear
  • Receptors, Steroid
  • Transcription Factors
  • farnesoid X-activated receptor
  • Chenodeoxycholic Acid
  • Luciferases
  • Histone Acetyltransferases
  • NCOA1 protein, human
  • Nuclear Receptor Coactivator 1